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  "Author": "Marina Evangelou",
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  "Description": "Bayesian hierarchical methods for pathway analysis of\ngenomewide association data: Normal/Bayes factors and Sparse\nNormal/Adaptive lasso. The Frequentist Fisher's product method\nis included as well.",
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    {
      "page": "PAGWAS-package",
      "title": "Pathway Analysis Methods for Genomewide Association Data",
      "topics": [
        "PAGWAS-package",
        "PAGWAS"
      ]
    },
    {
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        "create.pathway.matrix"
      ]
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      "title": "Calculates the Fisher's method p-value for each tested pathway",
      "topics": [
        "FM.chi.pvalue"
      ]
    },
    {
      "page": "genes",
      "title": "A data frame of 20 artificial genes with their chromosomes and positions on the genome",
      "topics": [
        "genes"
      ]
    },
    {
      "page": "genotypes",
      "title": "Genotypes for 100 SNPs and 75 individuals",
      "topics": [
        "genotypes"
      ]
    },
    {
      "page": "list.of.parameters",
      "title": "A list with possible hyper-parameters for NBF",
      "topics": [
        "list.of.parameters"
      ]
    },
    {
      "page": "NBF",
      "title": "Normal/Bayes factors method for finding associated pathways",
      "topics": [
        "NBF"
      ]
    },
    {
      "page": "pathways",
      "title": "A list of 2 pathways with their gene members",
      "topics": [
        "pathways"
      ]
    },
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        "return.a.SNAL"
      ]
    },
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        "return.hyperparameters.NBF"
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        "return.s2.SNAL"
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      "title": "Computes the area under a ROC curve",
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      "page": "SNAL",
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      "topics": [
        "SNAL"
      ]
    },
    {
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      "topics": [
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      ]
    },
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      "title": "A data frame of 100 artificial SNPs with their chromosomes and positions on the genome",
      "topics": [
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      ]
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    },
    {
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      ]
    }
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